Genome sequencing of Prevotella sp. F0323 for the Human Microbiome Pr... - SRA

SRX008003: Genome sequencing of Prevotella sp. F0323 for the Human Microbiome Project.
1 LS454 (454 GS FLX Titanium) run: 7,532 spots, 3.1M bases, 7.7Mb downloads

UUID: 6c4f8fb0-bff3-4beb-acc5-1bb2c3ba1c0c

Design: low coverage on 454

Submitted by: Broad Institute (BI)

Study: Reference Genome for Human Microbiome Project

PRJNA40691 • SRP001783 • All experiments • All runs

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<b><i>Prevotella</i> sp. oral taxon 302 str. F0323</b>. This strain will be used for comparative genome analysis.

Sample: Generic sample from Alloprevotella rava F0323

SAMN00013489 • SRS010002 • All experiments • All runs

Organism: Alloprevotella rava F0323

Library:

Name: 454-3629

Instrument: 454 GS FLX Titanium

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: SINGLE

Spot descriptor:

barcode

Group tag	Basecalls
Cairo	TCTTGGC

12 forward

Experiment attributes: (show all 6 attributes...) (hide...)

analysis_type: Bacterial 454 Alignment and Assembly

gssr_id: 38431.1

lsid: BROAD:SEQUENCING_SAMPLE:38431.1

material_type: Genomic DNA

project: G2881

work_request: 20701

Pipeline: show...hide...

Name	Step	Program	Version
base caller	2010-01-21 18:32:37.0	454BaseCaller	2.3

Runs: 1 run, 7,532 spots, 3.1M bases, 7.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR142720	7,532	3.1M	7.7Mb	2011-03-29

ID:: 8282

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